3.20 OEMCSMaxBonds

class OEMCSMaxBonds : public OEMCSFunc

The OEMCSMaxBonds class is an implementation of OEMCSFunc designed to order maximum common substructure matches by the maximum number of bonds included in the graph match. If two common structure matches have the same number of bonds, ties are split based on the number of atoms contained in the match.

double operator()(const OEMolBase &pattern,
                  const OEMolBase &target,
                  OEAtomBase **atoms,
                  OEBondBase **bonds)

This method is called by its parent OEMCSSearch instance. The method is called with the pattern molecule, target molecule, and arrays and atoms and bonds containing the correspondences found for the a common structure match. The method computes a value based on the number of atoms and bonds in the common structure match which is used to determine the maximum common structure match.

OEMCSFunc *CreateCopy() const

Deep copy constructor. This method returns an OEMCSMaxBonds instance. The memory for the returned instance is allocated dynamically. The operator delete method should be called for the returned instance to prevent a memory leak.

				OEChem - API Manual Version 1.3.1

				OEChem - API Manual Version 1.3.1